Hmmm. Just a thought, but even if the scan rate did result in equaling the magic flash rate that can induce seizures with lighting like strobes, a pattern being scanned at x times per second doesn't mean its flashing at x times per second. Its likely just more and less light during that range of time from one person's view as opposed to totally light and dark.
That said, you could flash one or more projectors on and off at almost any rate you'd like (assuming your DAC and software can achieve the intended rate). Assuming its a bright enough strobing to the sensitive person, I don't see why you couldn't trigger a seizure just like you can with standard strobes.
-David
"Help, help, I'm being repressed!"