I just read this thread from the start folks and I think its possible that we haven't fully identified the problem and jumped directly to solutions. Because we love to fix things!
Perhaps it would be helpful to describe what *should* be happening and then move onto the symptoms and finally describe the range of possible root-causes and associated solutions? Please forgive me as I will restate some of what's been said already as well as for stating what most regulars in this forum already know.
What Should Happen:
So let's assume you had an analog projector that was built with top quality parts and carefully set up for an end user. With bias properly set and in the case of the green, TEC that was set carefully, you should be able to ramp up each color from 0-100% and see a generally linear increase in apparent brightness. Ideally, red, green and blue should all come on as you ramp up at the same time (preferably close to zero). The green, being a 532nm module will start by jellybeaning (producing a dim dashed or dotted output), but that's the just the nature of DPSS units. The 532nm will also likely have plateaus or even slight decreases in output as you ramp up the modulation signal, but again, that's just typical of DPSS. The output of the other two, being direct diode units, should ramp up fairly linearly all the way to 100% modulation signal.
What Is Happening (Symptoms)
We have (or we believe) pictures of the same frame displayed in red, blue and green with BAM set approximately to decrease output to 30% at roughly the lower half of the image. Red shows no apparent change and appears to be fully on for the entire image. Green shuts off fully in the BAM region. Blue dims significantly in the BAM region.
Potential Causes
Blue: This one is the easiest as it looks roughly like we'd expect. Output is dropped significantly in the BAM region. So the blue module is analog and is decreasing output when set to 30% to a visible level clearly between fully off and fully on. This doesn't say that blue will start up cleanly at a very low modulation level (1-5%) or ramp up fairly linearly until topping out at 100% modulation, but at least its something.
Green: Being fully off at 30% output could be several things. Despite what the manufacturer said about the replacement driver, it may have be another TTL module. It could also be a driver that can do both TTL and analog, but is currently set to TTL. If the driver is indeed analog, it also may be a temperature problem where the TEC wasn't set at a level where the green would lase at 30%. (Likely set to be too cool). Setting a 532nm module for generally linear ramping of its output and stable output at any set level is not trivial and takes some experience, time and finesse to get right. If this is the case, simply swapping out the module without proper instruction was probably poor advice by the manufacturer. To help narrow down the analog vs TTL driver issue, I'd test your laser at a wider range of output levels. Does it come on at approximately 40-50% fully with nothing below that point and no increase in brightness between the on point and 100% modulation signal? If so, its TTL or set to TTL. Otherwise it just needs some TLC to get bias and the TEC temperature set to the right levels.
Red: This one is the most challenging in my opinion. It could be a TTL module that is kicking to 100% a bit early for a TTL module. (Most cheap Chinese TTL drivers flip from off to on at about 2.1 to 2.4 volts in my experience.) It could be what I believe Kecked and/or Cat were saying - the red output is hitting 100% way too early. This could be caused by modulation being 'artificially' ramped up too far by power problems in the projector, problems with the driver, or something artificially increasing the gain like the DZ Colour Modulation Boards that Stanwax sells. (I'm sure you don't have one of those in your projector, though

) Again, I'd try outputing the image at several output levels and see if you can find a range where you receive analog output. You can also measure the modulation signal into the red module when it isn't displaying anything and when it comes fully on. It should be 0V when you aren't projecting anything and fully on should be around 4.8V with a generally linear ramp in between fully off and fully on.
I've left out tons of things that could affect output to a lesser degree, but they aren't likely root-causes and this post is already too long. (Apologies to all.)
One last thing - the software. I don't use Quickshow, so I don't know, but many software packages have the ability to tweak the output levels for red, green and blue individually. This allows you to make sure they all come on at the same point and ramp up fairly evenly. This is really handy for artificially correcting less-than-ideal builds.
<Edit> Oh, and does Quickshow have a setting to force TTL behavior by color? If so, this may be set incorrectly for red and green. </Edit>
I'm sure I'm missing something in my analysis/comments above, so please point them out.
Cheers!
-David